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Counting k-mers with Bloom filters

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RobEdwards

Dr. Rob Edwards from San Diego State University describes how we can use the Bloom filter to efficiently weed out kmers that appear only once.

posted by saofachttl


Count Min Sketch
Count Min Sketch
Bloom Filters
Bloom Filters
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Introduction on counting kmers
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Bloom Filters Part 1 of 3
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What Are Bloom Filters?
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Mile's Guide to kmerbased GWAS
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Using Kmers for genome characterization by Kamil S. Jaron
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A problem so hard even Google relies on Random Chance
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DistributedMemory kmer Counting on GPUs
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Bloom Filters | Algorithms You Should Know #2 | Realworld Examples
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Genome Peek
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Bloom Filters
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