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Introduction on counting k-mers

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RobEdwards

Dr. Rob Edwards from San Diego State University provides an introduction on counting kmers in DNA and protein sequences

posted by saofachttl


kmer algorithms: Compare and Swap
kmer algorithms: Compare and Swap
Introduction to kmers
Introduction to kmers
Analyzing Gene Sequence Results with BLAST
Analyzing Gene Sequence Results with BLAST
ADS1: Indexing and kmer indexes
ADS1: Indexing and kmer indexes
Introducing kmers: sequences of length k
Introducing kmers: sequences of length k
How to Speak
How to Speak
Using Python to Find All Kmer Possibilities in a FASTA file
Using Python to Find All Kmer Possibilities in a FASTA file
Metagenome Binning
Metagenome Binning
Using Kmers for genome characterization by Kamil S. Jaron
Using Kmers for genome characterization by Kamil S. Jaron
ADS1: Variations on kmer indexes
ADS1: Variations on kmer indexes
Tesla’s 369 and Vortex Math: Is this really the key to the universe?
Tesla’s 369 and Vortex Math: Is this really the key to the universe?
Pacific Biosciences Sequencing
Pacific Biosciences Sequencing
Why almost all coal was made at the same time
Why almost all coal was made at the same time
Scientific Concepts You're Taught in School Which are Actually Wrong
Scientific Concepts You're Taught in School Which are Actually Wrong
Overlap vs Debruijn graphs | Genome assembly
Overlap vs Debruijn graphs | Genome assembly
Assembling ReadPairs
Assembling ReadPairs
illumina paired end sequencing
illumina paired end sequencing
BLAST 1
BLAST 1
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